PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.Z3NVH
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 894aa    MW: 98939.4 Da    PI: 4.4545
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.Z3NVHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.000692042123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C++Cg +F++++   +H r H
  Aradu.Z3NVH 20 HVCNKCGWPFPNPHPSAKHRRAH 42
                 79*****************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS0002802242IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 894 aa     Download sequence    Send to blast
MDSEDQRITQ TQGNENHGVH VCNKCGWPFP NPHPSAKHRR AHKKNCGTIE GYKLLVSEGQ  60
THLNPSDDEH FSDNDHKTQD NGGLRGKPIR SRDEQFLDAF DKWDSLDLAT DRKHLDFSVS  120
SKDNGSYAAE ESPSISKSRN DIVAQTPKIL QSERNDDCNL LELQDFKTDD SFALTSDSNT  180
CRSEAMSDVL LDNKIYVDGT KGTTLKEKDE IKPDRDTFEI VESSDSTIGR TFEGVSGAVT  240
EVVSLKSQVT DGAFILKENN GSGFPSVMPK EDLFLEAESA QSMNDSIDGI RVESEHMTEL  300
ATSGDIMISR EREEVNVDML TFPSCDDRPD VAHPHIEYEC HEPVVSQNSA SLHLSKALEQ  360
GHDGLKDSVT KENDFLINQG QLSKKGDRLS QDMHSLNSNM KKQVNCELMA AEMHAEECIE  420
VFNGESNRRL HETGAFMNDM KTEKNENHVV HFSEEQVSND GHKNSQQIDV PKGSLMAASD  480
ENACDASFVS ATSQTTAVII RDNTTHHEGN ITSIAVDDEC RRANIENDTG ICMNTLQSSN  540
VLSEINSSSI CGVEMGKFEQ SDIIDAQHAE SGIVKDATLP DTFESTILSE VVIDGPKGTP  600
EDIECSNRSP LSCTHEKIKE EEINSIDRSN EYSNIVASTS AAPHQTQDEE LLLKATEGID  660
LIEDSNRTGR DHSLNIEPYQ CVSPVEDTQD GQHGTKVPGV VAVPIQDRRD LPVQSDVQAT  720
NEAEAIASTD LSMSTETEKS NLKYPEASEE QQYEKSEMFE PPSFMTLVEP GLMLGPKSAP  780
EVETDPNKQK PDSNSSQAAW FPTLTHNAND KKSKSPKSEK DSVNQKHVRV TEDNGSGLTT  840
VNSILGCESP AMQIMNREST EEWNSSDDIT RKKKKDKSRS HWIQLLCCSS VETR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1870875RKKKKD
2870876RKKKKDK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015958347.10.0PREDICTED: uncharacterized protein LOC107482397 isoform X1
TrEMBLA0A0B2PSN30.0A0A0B2PSN3_GLYSO; Uncharacterized protein
STRINGGLYMA08G11280.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50511719